Metagenomics News and Research

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Phylogenomic characterization of the first genome sequences of the monkeypox virus outbreak variant

Researchers characterized infections caused by the monkeypox virus (MPXV).

2 Jun 2022

First draft genome sequence of the Monkeypox virus associated with major outbreak

In a recent study posted to the Virological discussion forum, researchers revealed a draft genome sequence of the monkeypox virus associated with a recent outbreak in Portugal.

23 May 2022

Gut virome may warn of a serious and often fatal disease in preterm infants

Immediately after birth, human infants begin to develop a complex, interwoven fabric of microbes in their gut.

26 Apr 2022

SARS-CoV-2 Delta-Omicron recombinant identified in a transplant patient treated with Sotrovimab

Researchers described a case of co-infection with SARS-CoV-2 variants of concern, Delta and Omicron.

8 Apr 2022

Researchers identify microbial cooperation as one of the causes of drug tolerance

The treatment of fungal infections is often hampered by fungal pathogens that do not respond, or are tolerant, against anti-fungal drugs.

23 Mar 2022

Wastewater monitoring reveals emergence and spread of SARS-CoV-2 Omicron in Alberta

Researchers utilize variant-specific RT-qPCR assays to monitor wastewater to monitor the prevalence of the Omicron and Delta variants.

16 Mar 2022

Study explores signature gut microbiome connection with immune checkpoint inhibitor response in advanced melanomas

Researchers from different countries performed a meta-analysis of real-world cross-cohorts and provided an association of the gut microbiome with immune checkpoint inhibitors response in patients with advanced melanomas.

2 Mar 2022

Genetic primers make it possible to identify potential sources of fecal contamination

"Who's peeing in the water?" Unlikely as it may seem, there is a great deal of science behind this question. Determining the source of fecal contamination-;an important public health issue-;requires years of research.

25 Feb 2022

UC San Diego receives $14.55 million to launch new Microbiome and Metagenomics Center

The National Institutes of Health's All of Us Research Program is a national effort to build a large, diverse database of 1 million or more people whom researchers can use to study health and disease.

20 Jan 2022

NIH-funded study will use machine learning to predict individual responses to diet

A new federally funded study will use machine learning to predict how an individual responds to a given diet, allowing physicians to offer patients personalized nutrition prescriptions to improve health and treat chronic diseases.

20 Jan 2022

NIH Common Fund supports Nutrition for Precision Health study

The National Institutes of Health is awarding $170 million over five years, pending the availability of funds, to clinics and centers across the country for a new study that will develop algorithms to predict individual responses to food and dietary routines.

20 Jan 2022

Surveillance approaches to monitor the presence of SARS-CoV-2 in a fully vaccinated population

Researchers at the University of Calgary Health Technology Assessment Unit investigated scientific evidence on various surveillance and testing methods to monitor the presence of the virus in a vaccinated population.

10 Nov 2021

Study may help investigate the role of gut virome in health and disease

A new study has added numerous previously uncharacterized viral genomes and genes to the ever-increasing worldwide pool of human gut viromes.

19 Oct 2021

New metagenome assembler can generate accurate DNA sequences

Metagenomics often involves sequencing DNA samples that can only be described as "tricky." Such DNA shows high heterogeneity, which can cause interspecies misassemblies.

11 Oct 2021

Gut microbiome can help or confer resistance to weight loss

Gut microbiota influences the ability to lose weight in humans, according to new research. The findings were published this week in mSystems, an open-access journal of the American Society for Microbiology.

14 Sep 2021

Next-Generation Sequencing and the Diagnosis of Disease

In this interview, Professor John Rossen talks about next-generation sequencing and it's implications for the diagnosis of disease.

From Tecan 4 Aug 2021

Researchers develop random priming amplification method for whole-genome sequencing of SARS-CoV-2 and H1N1

Researchers from the UK recently compared the performance of 4 different random priming amplification methods to recover SARS-CoV-2 RNA. In method 1 (H-P), the reverse transcriptase (RT) step included random hexamers, whereas, in methods 2-4, RT incorporated an octamer primer with a known tag. This study is published on the bioRxiv preprint server.

5 Jul 2021

RAMBO can cut indexing times for huge DNA databases

Rice University computer scientists are sending RAMBO to rescue genomic researchers who sometimes wait days or weeks for search results from enormous DNA databases.

28 Jun 2021

International travelers often return home with new bacterial strains, confirms study

Carried like stowaways in the guts of international travelers, new and potentially deadly strains of antimicrobial resistant superbugs may be coming to a community near you, suggests new research from Washington University School of Medicine in St. Louis.

7 Jun 2021

New process could reinvigorate the search for natural product drugs to treat cancers, viral infections

Researchers from Carnegie Mellon University's Computational Biology Department in the School of Computer Science have developed a new process that could reinvigorate the search for natural product drugs to treat cancers, viral infections and other ailments.

3 Jun 2021

Metagenomics News and Research

Phylogenomic characterization of the first genome sequences of the monkeypox virus outbreak variant

First draft genome sequence of the Monkeypox virus associated with major outbreak

Gut virome may warn of a serious and often fatal disease in preterm infants

SARS-CoV-2 Delta-Omicron recombinant identified in a transplant patient treated with Sotrovimab

Researchers identify microbial cooperation as one of the causes of drug tolerance

Wastewater monitoring reveals emergence and spread of SARS-CoV-2 Omicron in Alberta

Study explores signature gut microbiome connection with immune checkpoint inhibitor response in advanced melanomas

Genetic primers make it possible to identify potential sources of fecal contamination

UC San Diego receives $14.55 million to launch new Microbiome and Metagenomics Center

NIH-funded study will use machine learning to predict individual responses to diet

NIH Common Fund supports Nutrition for Precision Health study

Surveillance approaches to monitor the presence of SARS-CoV-2 in a fully vaccinated population

Study may help investigate the role of gut virome in health and disease

New metagenome assembler can generate accurate DNA sequences

Gut microbiome can help or confer resistance to weight loss

Next-Generation Sequencing and the Diagnosis of Disease

Researchers develop random priming amplification method for whole-genome sequencing of SARS-CoV-2 and H1N1

RAMBO can cut indexing times for huge DNA databases

International travelers often return home with new bacterial strains, confirms study

New process could reinvigorate the search for natural product drugs to treat cancers, viral infections

Sequencing & Genomics: Elevating Science and Healthcare eBook

Expanding research and clinical options for children with cancer

Examining how pain could play a direct protective role in the gut

From Puberty to Menopause: Clue’s CEO, Audrey Tsang on the Power of Femtech

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