Integrated synthesis and screening of MEK inhibitors

This article and associated images are based on a poster originally authored by Liana Bauer, Maximilian Seifermann, Julius Höpfner, Divya Varadharajan, Stefan Schmidt, Björn Fröhlich, Benjamin Wellenhofer, Charlotte Luchena, Carsten Hopf, Anna A. Popova, and Pavel A. Levkin, and presented at ELRIG Drug Discovery 2025 in affiliation with Karlsruhe Institute of Technology (KIT), Scivalon, Technische Hochschule Mannheim and Heidelberg University.

This poster is being hosted on this website in its raw form, without modifications. It has not undergone peer review but has been reviewed to meet AZoNetwork's editorial quality standards. The information contained is for informational purposes only and should not be considered validated by independent peer assessment.

The platform

The platform was a superhydrophobic background made up of a variable amount of droplets.

Image Credit: Liana Bauer et al., in partnership with ELRIG (UK) Ltd.

Aim

  • Discovery of novel MEK inhibitors
  • Overactive kinase implicated in 30 % of all cancers
  • Allosteric inhibition to circumvent acquired resistance

Mitogen-activated protein kinase kinase 1 - MEK.

Image Credit: Liana Bauer et al., in partnership with ELRIG (UK) Ltd.

Library design

The library design consisted of an FDA-approved inhibitor mirdametinib, a core structure of FIBA, and 325 compounds (25 boronic acids x 13 amino acids).

Image Credit: Liana Bauer et al., in partnership with ELRIG (UK) Ltd.

Workflow

The workflow process from synthesis, to chemical analysis and biological screening.

Image Credit: Liana Bauer et al., in partnership with ELRIG (UK) Ltd.

Chemical analysis

  • Stepwise quantification of each intermediate on droplet array with d = 2.83 mm
  • Synthesis in total volume of 5 μl / spot
  • Extraction from surface for analysis via LCMS
  • Qualitative Analysis of all library compounds via MALDI-MS and MS Imaging
  • Integration of synthesis and analysis without any transfer on spots with d = 900 μm
  • Synthesis in total volume of 200 nl / spot

Successful compound identification of 93 % after manual transfer, and 89 % directly on-chip.

Image Credit: Liana Bauer et al., in partnership with ELRIG (UK) Ltd.

On-chip screening

  • Direct on-chip screening on aroplet Array with d = 1.4 mm
  • Screening of HT-29 cells, a human colorectal cancer cell line
  • Optimization of compound release to an assay concentration of ~10 μM
  • Comparison of the amount of dead cells after treatment with 10 μM mirdametinib (= positive control)
  • 46 promising compounds with higher response in direct comparison

Graph showing primary hit identification. Images showing positive and negative control for compounds 31 and 65. Graph showing normalized cell death for the 325 different compounds, with values ranging from 93 % to 242 %.

Image Credit: Liana Bauer et al., in partnership with ELRIG (UK) Ltd.

Summary

  • Miniaturized platform for integration of synthesis, analysis, and screening
  • Synthesis of 325 compounds using ~10 mg of reactants and ~250 μl solvent
  • Identification of 46 primary hit compounds
  • Synthesis and screening in only seven days

About Karlsruhe Institute of Technology

The Karlsruhe Institute of Technology (KIT), known as “The University in the Helmholtz Association,” is the only German university of excellence that integrates a national large-scale research sector. It offers students, researchers, and staff exceptional opportunities for learning, teaching, and collaboration. With origins dating back to 1825, KIT in its current form was established in 2009 through the merger of the Technical University of Karlsruhe and the Karlsruhe Research Center.

About ELRIG (UK) Ltd.

The European Laboratory Research & Innovation Group (ELRIG) is a leading European not-for-profit organization that exists to provide outstanding scientific content to the life science community. The foundation of the organization is based on the use and application of automation, robotics and instrumentation in life science laboratories, but over time, we have evolved to respond to the needs of biopharma by developing scientific programmes that focus on cutting-edge research areas that have the potential to revolutionize drug discovery.

Comprised of a global community of over 12,000 life science professionals, participating in our events, whether it be at one of our scientific conferences or one of our networking meetings, will enable any of our community to exchange information, within disciplines and across academic and biopharmaceutical organizations, on an open access basis, as all our events are free-of-charge to attend!

Our values

Our values are to always ensure the highest quality of content and that content will be made readily accessible to all, and that we will always be an inclusive organization, serving a diverse scientific network. In addition, ELRIG will always be a volunteer led organization, run by and for the life sciences community, on a not-for-profit basis.

Our purpose

ELRIG is a company whose purpose is to bring the life science and drug discovery communities together to learn, share, connect, innovate and collaborate, on an open access basis. We achieve this through the provision of world class conferences, networking events, webinars and digital content.


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Last Updated: Nov 11, 2025

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