Optimizing HTRF settings in multi-mode microplate readers

HTRF assays from Cisbio have advanced to cover diverse areas, including G protein-coupled receptors, kinases and cell signaling, epigenetics, and biomarkers. A broad range of toolbox reagents and kits is offered to support studies on protein-protein interactions, nuclear receptor assays, receptor dimerization, ligand binding, receptor internalization, enzyme assays, and other applications. 

HTRF uses two fluorophores, a donor and an acceptor, to label proteins or other targeted biomolecules. When these biomolecules interact, their proximity enables fluorescence resonance energy transfer (FRET) from the donor to the acceptor fluorophore. 

The use of long-lifetime fluorescent lanthanide cryptates as donors enables time-resolved detection of HTRF assays, reducing short-lived background fluorescence from compounds and other materials. Detecting time-resolved FRET (TR-FRET) using a microplate reader provides a readout of biomolecular binding.

A microplate reader must meet Cisbio’s performance standards to achieve reliable HTRF results. Key factors include the reader’s optics, energy source, detectors, and detection settings.

Cisbio readers use tailored components for HTRF detection, such as a dedicated detection cartridge for the SpectraMax i3x and Paradigm readers, and a TRF module with verified filters for the SpectraMax iD5.

Cisbio’s HTRF certification program ensures that readers displaying the “HTRF compatible” logo fulfill the necessary requirements for the best HTRF performance. This article outlines the optimized settings verified by Cisbio for Molecular Devices HTRF-compatible microplate readers.

Molecular Devices HTRF-compatible microplate readers

  • SpectraMax® i3x Multi-Mode Microplate Reader
    • HTRF Detection Cartridge (Molecular Devices P/N 0200-7011, or custom TR-FRET for Tb/green)
  • SpectraMax® iD5 Multi-Mode Microplate Reader
    • HTRF Detection System (Molecular Devices P/N 6590-0144; includes Enhanced TRF Module, excitation and emission filters)
  • SpectraMax® Paradigm® Multi-Mode Microplate Reader
    • HTRF Detection Cartridge (Molecular Devices P/N 0200-7011, or custom TR-FRET for Tb/green)
  • SpectraMax® M5e Multi-Mode Microplate Reader
  • FlexStation® 3 Multi-Mode Microplate Reader

HTRF-compatible SpectraMax Multi-Mode Readers. SpectraMax i3/i3x and Paradigm readers can be equipped with the HTRF detection cartridge. The SpectraMax iD5 reader uses the HTRF detection system, which includes an Enhanced TRF Module and filters for excitation and emission

Figure 1. HTRF-compatible SpectraMax Multi-Mode Readers. SpectraMax i3/i3x and Paradigm readers can be equipped with the HTRF detection cartridge. The SpectraMax iD5 reader uses the HTRF detection system, which includes an Enhanced TRF Module and filters for excitation and emission. Image Credit: Molecular Devices UK Ltd

About the reader setup recommendations

HTRF assays are offered in three distinct donor/acceptor fluorophore combinations, each necessitating specific reader configurations to ensure optimal results:

  • Europium cryptate donor with red acceptor (Eu/red)
  • Terbium cryptate donor with red acceptor (Tb/red)
  • Terbium cryptate donor with green acceptor (Tb/green), Tag-lite

SpectraMax i3/i3x readers

Source: Molecular Devices UK Ltd 

Parameters Settings  
Europium cryptate donor / red acceptor, Terbium cryptate donor / red acceptor
Optical configuration Cartridge HTRF
Read mode TR-FRET
Read type Endpoint
Wavelengths Fixed per cartridge Ex 340, Em1 616, Em2 665
Plate type User selectable A white plate is required for high-performance HTRF measurement
Read area User selectable
PMT and optics
Number of pulses 30
Excitation time (fixed) 0.05 (fixed)
Measurement delay 0.03 ms
Integration time 0.4 ms
Read height Plate format- and volume-dependent; optimize for each new plate type or volume used
Terbium cryptate donor / green acceptor, Tag-lite
Optical configuration Cartridge Custom TR-FRET (Tag-lite HTRF)
Read mode TR-FRET
Read type Endpoint
Wavelengths Fixed per cartridge Ex 340/80, Em1 616/15, Em2 665/10
Plate type User selectable A white plate is required for high-performance HTRF measurement
Read area User selectable
PMT and optics
Number of pulses 30
Excitation time (fixed) 0.05 (fixed)
Measurement delay 0.03 ms
Integration time 0.4 ms
Read height Plate format- and volume-dependent; optimize for each new plate type or volume used

 

SpectraMax Paradigm reader

Source: Molecular Devices UK Ltd 

Parameters Settings  
Europium cryptate donor / red acceptor, Terbium cryptate donor / red acceptor
Cartridge HTRF
Read mode TR-FRET
Read type Endpoint
Wavelengths Fixed per cartridge Ex 340, Em1 616, Em2 665
Plate type User selectable
Read area User selectable
PMT and optics
Number of pulses 30
Excitation time (fixed) 0.05 (fixed)
Measurement delay 0.03 ms
Integration time 0.5 ms
Read height Plate format- and volume-dependent; optimize for each new plate type or volume used
Terbium cryptate donor / green acceptor, Tag-lite
Cartridge Custom TR-FRET (Tag-lite HTRF)
Read mode TR-FRET
Read type Endpoint
Wavelengths Fixed per cartridge Ex 340/80, Em1 616/15, Em2 665/10
Plate type User selectable  
Read area User selectable
PMT and optics
Number of pulses 30
Excitation time (fixed) 0.05 (fixed)
Measurement delay 0.03 ms
Integration time 0.5 ms
Read height Plate format- and volume-dependent; optimize for each new plate type or volume used

SpectraMax iD5 reader

Source: Molecular Devices UK Ltd 

Parameters Settings  
Europium cryptate donor / red acceptor, Terbium cryptate donor / red acceptor
Read mode TR-FRET The enhanced TRF module must be installed
Read type Endpoint
Wavelengths Use filters Ex 340/70
Em1 665/10
Em2 616/10
Plate type User selectable
Read area User selectable
PMT and optics
Flashes per read 50
Excitation time (fixed) 0.05 (fixed)
Measurement delay 0.1 ms
Integration time 0.6 ms
Read height Plate format- and volume-dependent; optimize for each new plate type or volume used

SpectraMax M5e and FlexStation 3 readers

Source: Molecular Devices UK Ltd 

Parameters Settings  
Europium cryptate donor / red acceptor
Read mode TR-FRET
Read type Endpoint
Wavelengths Number of wavelength pairs: 2 Ex 314; Em1 620, with 570 cutoff; Em2 665, with 630 cutoff
Plate type User selectable A white plate is required for high-performance HTRF measurement
Read area User selectable
TRF settings

Integration delay

Integration time

50

300

PMT and optics Flashes per read 50 to 100
Terbium cryptate donor / red acceptor
Read mode TR-FRET
Read type Endpoint
Wavelengths Number of wavelength pairs: 2 Ex 340; Em1 620, with 570 cutoff; Em2 665, with 630 cutoff
Plate type User selectable A white plate is required for high-performance HTRF measurement
Read area User selectable
TRF settings

Integration delay

Integration time

50

300

PMT and optics Flashes per read 50 to 100
Terbium cryptate donor / Green acceptor, Tag-lite
Read mode TR-FRET
Read type Endpoint
Wavelengths Number of wavelength pairs: 2 Ex 340; Em1 520, with 495 cutoff; Em2 620, with 570 cutoff
Plate type User selectable A white plate is required for high-performance HTRF measurement
Read area User selectable  
TRF settings

Integration delay

Integration time

50

300

PMT and optics Flashes per read 50 to 100

Conclusion

Using its standard certification methods, Cisbio evaluated SpectraMax multi-mode microplate readers with time-resolved fluorescence detection. The readers exceeded HTRF performance requirements and are supplied with optimized cartridges and filters to support the full range of assays, including Tag-lite.

Acknowledgements

Produced from materials originally authored by Cathy Olsen, Sr. Applications Scientist at Molecular Devices.

About Molecular Devices UK Ltd

Molecular Devices is one of the world’s leading providers of high-performance bioanalytical measurement systems, software, and consumables for life science research, pharmaceutical, and biotherapeutic development. Included within a broad product portfolio are platforms for high-throughput screening, genomic and cellular analysis, colony selection, and microplate detection. These leading-edge products enable scientists to improve productivity and effectiveness, ultimately accelerating research and the discovery of new therapeutics. Molecular Devices is committed to the continual development of innovative solutions for life science applications. The company is headquartered in Silicon Valley, California, with offices around the globe. For more information, please visit www.moleculardevices.com


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Last updated: Sep 24, 2025 at 7:46 AM

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