COVID-19 and Diarrhea

In the earliest stages of the pandemic, the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus was thought to cause diseases of the respiratory system, with the thin cells of the respiratory system providing an environment for the infection to spread among humans via the respiratory tract. Across the globe, populations were asked to remain vigilant of three classic symptoms: a fever, a new and continuous cough and shortness of breath

As the pandemic has continued, evidence that the infection can manifest in non-respiratory symptoms has grown. Currently, the Centres for Disease Control and Prevention (CDC) list eleven symptoms as indicative of COVID-19, including two gastrointestinal symptoms.

Interest in the impact of COVID-19 on the gastrointestinal system began to emerge in line with an increasing number of patients presenting with symptoms including nausea, diminished appetite and diarrhea. Early case reports demonstrated the presence of the virus in stool samples, suggestive of an additional route to transmission via the fecal-oral route.

gastrointestinalImage Credit: Explode /

Biological mechanisms for SARS-CoV-2 and gastrointestinal symptoms

It is widely accepted that the COVID-19 causing virus can enter and infect host cells via angiotensin-converting enzyme 2 (ACE-2). ACE-2 is an enzyme involved in lowering blood pressure and inflammation and is found on the surface of many cell types. The spike protein of the SARS-CoV-2 virus binds with ACE-2 on the surface of the host cell, resulting in the endocytosis of the virus and enzyme into the cell. ACE-2 is highly expressed in the upper and lower gastrointestinal tract, providing a prerequisite for SARS-Cov-2 infection.

Prevalence of diarrhea in COVID-19

Diarrhea as a symptom of COVID-19 has significant consequences for public health. The potential for the virus to be transmitted via the fecal-oral route presents additional challenges for areas with poor sanitation. Current disinfection strategies such as chlorination may prove to be insufficient against the virus.

A systematic review of gastrointestinal symptoms in COVID-19 showed an overall prevalence of diarrhea between 5 – 10%, although rates varied extensively between studies. Larger cohort studies report prevalence rates between 20-30%.

Diarrhea may be underreported

Studies that look at the prevalence of diarrhea symptoms following SARS-CoV-2 infections have reported lower rates than those observed in other coronaviruses, with studies reporting diarrhea in up to 50% of patients with SARS and 75% of patients with MERS. However, researchers believe that the currently available data may underestimate the burden of COVID-19 related diarrhea. Few studies conducted to date have included a specific criterion for describing diarrhea, neither in terms of describing the number of evacuations per day nor consistency of stools.

Studies that describe COVID-19 symptomology have tended to focus on the most critically ill patients: those who are at risk of severe illness, long-term effects, or mortality. The impact of the virus on the respiratory or circulatory systems has taken precedence over the impact of the infection on the gastrointestinal system. Furthermore, as COVID-19 testing programs and public health information programs have largely focused on describing respiratory symptoms, it is plausible to suggest that there may be a cohort of undiagnosed patients with low severity illness but with digestive symptoms, such as diarrhea.

Prognostic implications of diarrhea in COVID-19

The correlations between diarrhea and symptom severity, and diarrhea and clinical outcomes in COVID-19 still require clarification. In some cases, studies have found that diarrhea is more prevalent in patients with severe COVID-19 compared to patients with mild or moderate disease. Similarly, the presence of COVID-19 with gastrointestinal symptoms has been shown to increase the risk of acute respiratory distress syndrome and mechanical ventilation, as compared with COVID-19 without gastrointestinal symptoms. Other studies, however, have not found such associations between the presence of diarrhea and the severity of COVID-19.

The research regarding whether gastrointestinal symptoms emerge prior to, or after respiratory symptoms is also mixed. In one study conducted in the United States, patients exclusively developed diarrhea after developing the classic COVID-19 of a cough, fever, and shortness of breath.

More recently, one study identified subgroups of COVID-19 patients: one group who developed respiratory symptoms only, one group who developed both respiratory and gastrointestinal symptoms, and a final, small sub-group who developed gastrointestinal symptoms only. Patients who presented with digestive symptoms had a longer course between symptom onset and viral clearance, indicating a possible higher viral burden. Critically, these patients also took longer to seek medical care. This, teamed with an absence of respiratory symptoms, could indicate a subset of patients who may be unintentionally spreading the virus.


Healthcare staff should recognize that new-onset diarrhea could be indicative of COVID-19 infection in the absence of classic respiratory symptoms. Patients should be encouraged to quarantine and seek medical advice, especially if they have recently been in contact with another infected individual. Preventative measures against the spread of the virus should also include consideration of the oral-fecal transmission route.

Symptoms of Coronavirus Disease 2019


  • D'Amico, F., Baumgart, D. C., Danese, S., & Peyrin-Biroulet, L. (2020). Diarrhea During COVID-19 Infection: Pathogenesis, Epidemiology, Prevention, and Management. Clinical gastroenterology and hepatology: the official clinical practice journal of the American Gastroenterological Association, 18(8), 1663–1672.
  • Guan, W. J., Ni, Z. Y., Hu, Y. et al. (2020). Clinical Characteristics of Coronavirus Disease 2019 in China. The New England journal of medicine, 382(18), 1708–1720.
  • Han, C., Duan, C., Zhang, S., Spiegel, B., Shi, H., Wang, W., Zhang, L., Lin, R., Liu, J., Ding, Z., & Hou, X. (2020). Digestive Symptoms in COVID-19 Patients With Mild Disease Severity: Clinical Presentation, Stool Viral RNA Testing, and Outcomes. The American journal of gastroenterology, 115(6), 916–923.
  • Jin, X., Lian, J. S., Hu, J. H., Gao, J., Zheng, L., Zhang, Y. M., Hao, S. R., Jia, H. Y., Cai, H., Zhang, X. L., Yu, G. D., Xu, K. J., Wang, X. Y., Gu, J. Q., Zhang, S. Y., Ye, C. Y., Jin, C. L., Lu, Y. F., Yu, X., Yu, X. P., … Yang, Y. (2020). Epidemiological, clinical and virological characteristics of 74 cases of coronavirus-infected disease 2019 (COVID-19) with gastrointestinal symptoms. Gut, 69(6), 1002–1009.
  • Yan, R., Zhang, Y., Li, Y., Xia, L., Guo, Y., & Zhou, Q. (2020). Structural basis for the recognition of SARS-CoV-2 by full-length human ACE2. Science (New York, N.Y.), 367(6485), 1444–1448.

Further Reading

Last Updated: Sep 23, 2021

Clare Knight

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Clare Knight

Since graduating from the University of Cardiff, Wales with first-class honors in Applied Psychology (BSc) in 2004, Clare has gained more than 15 years of experience in conducting and disseminating social justice and applied healthcare research.


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  1. Elisa Jones Elisa Jones United Kingdom says:

    I do believe there may be validity and truth to this research. In early Jan-20 I had a mysterious unidentified virus whereby symptoms were fever / shivers, severe diarrhoea, full loss of appetite, heavy fatigue and light breathlessness and all symptoms lasted intensively for 2 weeks. My appetite, stool patterns and energy levels took 2 months to gradually return to normal. Whilst stools were tested at time there was no covid testing then. GP told me some viruses are not known about so whilst I accepted that it troubled me as never been so ill since having chickenpox when 30 and so when covid declared itself I started to wonder was it that? I therefore follow research based on my symptoms as I do instinctively believe that maybe it reacts with certain body types this way. But then it was too early for covid? I effectively quarantined as I was too ill to go to work for 2+ weeks and live alone so didn't appear to pass it on. All a bit of a mystery and will never know for sure but wanted to blog about it as never usually an option to. I am a 50 year old female. Keep up the research!

  2. Rachel Street Rachel Street United Kingdom says:

    There are plenty of people reporting very similar sets of symptoms prior to March 2020, and anecdotally I believe children in schools have been manifesting their covid infections as sickness, diarrhoea and headaches, but have not been tested until now. Yes please continue the research and also can anyone tell me, if you have the virus in your gut with stomach pains and diarrhoea, is it clear that a nose/throat swab test will pick it up? Is it possible that you have the virus in your gut, but do not have enough viral load in your respiratory pathway to show as a positive case?

  3. Frank Collins Frank Collins United States says:

    As a retired RN who has been studying the professional literature on the coronavirus since February 2020, I would suggest the frequently published hypothesis that COVID-19 is an enterovirus - similar to polio - has documented merit.  It might help to recall virologists and public health experts expended thirty years before they recognized polio was a fecal-transmission pathogen and its “respiratory” spread was on overblown, dubious vector.  

    Like COVID-19, polio can be found in the upper airway/nasopharyngeal region but feces is the critical concern.  The insurmountable hurdles to a successful “confine-and-contain-covid” public health program ?  Open defecation, filthy squat toilets, microplume from flush toilets, lack of water and soap, lax anal/hand hygiene and a clear understanding of germs and how they are spread and cause disease.  Afghanistan and Pakistan are still battling this virus.

    The WHO and CDC both declare, repeatedly, there currently is no evidence of fecal transmission of covid-19.  However, absence of evidence is not evidence of absence and the history of medicine has many depressing moments of failure to connect the right dots.  When will this virus produce its own insightful Ignaz Semmelweis or John Snow?

  4. Laura Walczak Laura Walczak United States says:

    I was struck down with covid in March 2020 and it was strictly in my GI tract. I've never been so ill before and thought I might die. No hospital or doctor would help me because I wasn't coughing. I now have Omicron and for the first week had typical upper respiratory symptoms. Thought it was clearing out but in this second week the GI symptoms are taking over. I agree a that the viral load is higher- i feel like it replicates better in the GI tract - at least in my body. I tested positive at day 10 and still have symptoms at day 15. No appetite, losing weight, and extreme tiredness. Please keep researching this - no one takes me sery with these symptoms even when I test positive.

The opinions expressed here are the views of the writer and do not necessarily reflect the views and opinions of News Medical.
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