Redefining Alzheimer’s development by mapping disease sequences

By mapping millions of real patient health records, UCLA scientists have uncovered four unique and predictable routes to Alzheimer’s, reshaping how we detect, understand, and potentially prevent the condition.

Human head shape with 4 extracted puzzle piecesStudy: Identifying common disease trajectories of Alzheimer’s disease with electronic health records. Image credit: Vitalii Vodolazskyi/Shutterstock.com

University of California, Los Angeles researchers identified four distinct pathways leading to Alzheimer’s disease. The study is published in eBioMedicine.

Background

Alzheimer’s disease (AD) is a progressive neurodegenerative disorder characterized by memory loss, cognitive decline, and difficulty performing daily activities. The prevalence of AD and AD-related dementia is steadily increasing worldwide. In the United States, over 6.7 million people live with these conditions, which is projected to reach 13 million by 2050.

Several risk factors have been identified for AD, including cardiovascular disease, hearing loss, depression, diabetes, traumatic brain injury, and physical inactivity. Developing preventive, diagnostic, and therapeutic strategies for AD requires an in-depth understanding of how these risk factors co-occur and in what sequence they emerge, rather than analyzing individual risk factors. 

Evaluation of the timing and sequence of potential risk factors is particularly important for accurate AD risk prediction and identification of effective time frames for applying preventative measures or treatments. This study used millions of electronic health records to identify disease pathways that sequentially progress toward AD.

The Study

The researchers analyzed health data from 24,473 patients in the University of California Health Data Warehouse. They validated the findings in the nationally diverse All of Us Research Program, a diverse, nationally representative cohort.   

After filtering out diagnoses that were not positively associated with subsequent AD, researchers identified 5,762 patients who contributed 6,794 unique disease trajectories of AD. Disease trajectory is defined as a sequence of health events over time occurring irregularly and encompassing diagnoses, medications, procedures, and laboratory tests. Each trajectory included at least three temporally ordered diagnoses, and many patients were found to follow more than one distinct disease path, with up to three trajectories per individual.

Researchers mapped the temporal relationships between diagnoses leading to AD using advanced computational methods, including dynamic time warping, a method for comparing time series with irregular timing, k-means clustering, and network analysis.     

Key findings

The study identified four distinct disease trajectories leading to AD. These trajectories were: a mental health trajectory representing psychiatric conditions leading to cognitive decline; an encephalopathy trajectory representing brain dysfunctions that escalate over time; a mild cognitive impairment trajectory representing gradual progression of cognitive decline; and a vascular disease trajectory representing cardiovascular conditions contributing to dementia risk.

Each pathway had characteristic demographic features, comorbidity patterns, and progression rates, suggesting different progression trajectories for different populations.

The mental health trajectory focusing on depressive episode (F32) mainly affected women and Hispanic people and progressed to AD.  The mild cognitive impairment trajectory showed the progression from mild cognitive impairment (G31.84) to AD, and the vascular disease trajectory exhibited the longest electronic health record histories and the highest comorbidity burden, which highlights the chronic nature of cerebrovascular disease.

The encephalopathy trajectory was associated with the most rapid progression to AD and subsequent death, highlighting a more aggressive disease course. The study further found that the encephalopathy cluster showed the shortest interval from the first disease indicator to AD diagnosis, and from AD diagnosis to death, suggesting a faster disease course in that subgroup.

The presence of shared vascular risk factors such as hypertension across multiple trajectories indicates that these distinct disease progression pathways may be associated with common pathophysiological mechanisms. These findings highlight the importance of considering and managing shared risk factors to prevent the progression of multiple disease pathways to AD.

The study found consistent directional ordering for approximately 26% of diagnostic progressions regarding directionality of relationships within these trajectories. For example, essential hypertension is frequently followed by depressive episodes, which then progress to AD, suggesting a potential causal sequence.

The validation of study findings in the All of Us Research Program highlighted the generalizability of these trajectories across diverse populations and healthcare settings. These progression trajectories were found to predict the risk of AD more accurately than individual risk factors.

As researchers suggest, healthcare professionals can use these trajectories to identify high-risk patients early, develop targeted interventions, and restrict harmful consequences.

The study used causal inference modeling (Greedy Equivalence Search) to identify likely directional links between diagnoses within each trajectory. The encephalopathy cluster showed more consistent directional relationships (42.9%), indicating a more substantial potential for causal interpretation in this group.

The researchers also constructed simplified “backbone” networks to highlight the most common disease sequences within each trajectory, using modularity-based pruning to reduce noise and emphasize dominant patterns.

Study significance

The study provides a comprehensive framework for identifying distinct and interconnected disease progression routes that lead to AD. This approach can be applied in different clinical settings to improve risk assessment, timely diagnosis, and targeted interventions. Healthcare professionals should consider the cumulative impact of sequential disease progression while assessing AD risk.

The distinct trajectories identified in the study suggest that AD may develop through multiple pathways. The identification of specific risk factors such as depression, cerebrovascular disease, and other neurodegenerative conditions that often precede AD by several years provides opportunities for early intervention.

The dataset analyzed in the study excluded patients older than 90 years, which may restrict the generalizability of its findings to the population with a high prevalence of AD. Furthermore, health data was collected from six academic health systems in California, which may limit representativeness relative to population-based samples.

Potential misclassifications of AD patients in electronic health records may affect the study findings. Given this concern, researchers advise interpreting these trajectories as pathways leading to clinically diagnosed AD rather than biologically confirmed AD, which would require biomarkers for amyloid or tau pathology. Some diagnostic codes like “unspecified dementia” may reflect temporary or transitional clinical labels, highlighting the real-world complexity of disease classification in health records.

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Journal reference:
Dr. Sanchari Sinha Dutta

Written by

Dr. Sanchari Sinha Dutta

Dr. Sanchari Sinha Dutta is a science communicator who believes in spreading the power of science in every corner of the world. She has a Bachelor of Science (B.Sc.) degree and a Master's of Science (M.Sc.) in biology and human physiology. Following her Master's degree, Sanchari went on to study a Ph.D. in human physiology. She has authored more than 10 original research articles, all of which have been published in world renowned international journals.

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