Study develops new methodology to analyse genetic bases of pathogenic bacteria

The study has developed a pioneering methodology to analyse the genetic bases of pathogenic bacteria and can be used to identify therapeutic targets in order to develop new antimicrobial agents. The potential of this methodology, known as TREP (Transformed Recombinant Enrichment Profiling), lies in "its huge capacity to rapidly identify bacterial virulence factors, which are the mechanisms a microorganism relies on to be able to enter the human body, invade tissues and cause disease and which can subsequently be used as antimicrobial targets", according to Junkal Garmendia-García, leader of the study and tenured CSIC scientist in the IdAB, a joint centre of the Spanish Scientific Research Council (CSIC), the Public University of Navarre (NUP/UPNA) and the Government of Navarre.

This work has applied the TREP methodology to the study of the genetic architecture of the intracellular invasion caused by the respiratory pathogen Haemophilus influenzae, which colonises the airways of chronic respiratory patients and which is associated with the prolonged worsening of COPD symptoms. "This pathogen invades the respiratory epithelium, which is the tissue that lines the respiratory tract, and acts as a protective barrier of the airways, and the infection it causes escapes the immune response and therapeutic intervention during the chronic infection," explained Junkal Garmendia. "Thanks to that the pathogen persists."

Haemophilus influenzae pathogen not only to invade the epithelial tissue but also for several of them to stick to each other and thus form groups or microcolonies. "On balance, the study identifies bacterial elements the blocking of which could interfere in the invasion of the pathogen, which, in turn, would presumably increase antibiotic effectiveness in combatting the respiratory infection," pointed out Junkal Garmendia.

Other respiratory pathogens

The TREP methodology can be applied to a broad range of bacterial species including, among others, the respiratory pathogens Streptococcus pneumoniae (which causes pneumonia, sinusitis, etc.) and Moraxella catarrahlis (which causes otitis, bronchitis, sinusitis and laryngitis), apart from the above-mentioned Haemophilus influenzae.