A wide-ranging review finds that everyday factors from diet and alcohol to stress, hygiene, and sexual behaviour may influence microbial balance across four key body sites in women, with possible implications for infection risk, inflammation, and long-term health.

Study: Shaping the Female Microbiome: A Review of Lifestyle Factors Influencing the Vaginal, Gut, Oral, and Skin Microenvironments. Image Credit: Julien Tromeur / Shutterstock
In a recent comprehensive review published in the journal Microbial Ecology, researchers synthesized evidence investigating the impacts of modifiable health behaviors, including diet, tobacco use, obesity, alcohol use, stress, physical activity, and hygiene, on the composition and function of the female microbiome.
Review findings suggest that lifestyle behaviors are associated with significant shifts in microbial diversity and function, offering a foundation for future research and potential targeted clinical interventions and personalized health strategies.
Female Microbiome Dysbiosis and Sex Differences
Decades of research have established the human microbiome as an essential regulator of immune response and metabolic processes. However, recent reviews highlight that contemporary research largely fails to account for potential sexual dimorphisms in microbial composition.
Modern evidence has found that sexual dimorphism exists, and in females, these differences are largely driven by cyclical fluctuations in sex hormones, which often accompany reproductive events and variations in body composition. This phenomenon is best studied within the vaginal tract, where Lactobacillus dominance is now an established hallmark of eubiosis, a healthy microbial balance.
In contrast, dysbiosis, a pathological imbalance of baseline microbial communities, is strongly associated with several adverse outcomes, including pelvic inflammatory disease (PID), certain sexually transmitted infections (STIs), endometriosis, and maternal abnormalities such as preterm birth.
Recent evidence further links gut and skin microbiome dysbiosis to metabolic disorders, such as obesity, and inflammatory conditions, such as acne. Despite the importance of these site-specific interactions, historical research has often combined male and female data or focused on single anatomical locations, limiting understanding of the gut-vagina axis and other cross-site interactions.
Female Microbiome Review Scope and Methods
The present review aimed to address this clinical knowledge gap by providing a comprehensive examination of how modifiable lifestyle and environmental factors influence microbial communities in women. The review focused exclusively on females and synthesized evidence across four major sites: vaginal, gut, oral, and skin microbiomes.
The authors analyzed only non-pharmacologic variables, isolating behavioral effects from medical interventions such as antibiotics. Rather than performing a pooled statistical analysis, they synthesized reported associations, including changes in α-diversity (within-site richness) and β-diversity (between-individual differences), to describe microbial shifts across studies.
The study also discussed core taxa present across sites, including Bifidobacterium, Prevotella, and Streptococcus, which have been identified across multiple anatomical environments. The review aimed to summarize how specific exposures alter environmental conditions and influence microbial growth.
Diet, Smoking, Obesity, and Hygiene Effects
Review analyses identified dietary habits, smoking status, alcohol use, and obesity as major modifiers of the female microbial ecosystem.
Several studies link nutrition to the gut-vagina axis, suggesting that diet influences vaginal microbiota via short-chain fatty acids (SCFAs) and estrogen metabolism.
High dietary fiber intake was associated with reduced systemic levels of sex hormones, including estrogen, progesterone, follicle-stimulating hormone (FSH), and luteinizing hormone (LH). Diets rich in fiber and starch were linked to more favorable vaginal microbial profiles and reduced risk of bacterial vaginosis, although the mechanisms remain unclear.
In contrast, higher alcohol consumption was associated with reduced Lactobacillus and increased α-diversity in the vagina, a profile linked to increased susceptibility to bacterial vaginosis.
Individuals with obesity (body mass index (BMI) > 30) showed shifts toward higher levels of Megasphaera and Mobiluncus and lower levels of Lactobacillus.
In the gut microbiome, obesity was associated with higher Firmicutes-to-Bacteroidetes ratios and lower Bifidobacterium levels. Alcohol use was associated with reduced Bacteroidetes and increased Proteobacteria and Fusobacteria.
Smoking exhibited a dose-dependent pattern consistent with anti-estrogenic effects. Chronic smokers showed reduced levels of Lactobacillus and increased levels of inflammatory metabolites in the vaginal tract.
Hygiene behaviors, particularly vaginal cleaning product use, were associated with a threefold increase in adverse outcomes such as bacterial vaginosis, STIs, and urinary tract infections (UTIs). Stress was identified as a cortisol-mediated inhibitor of glycogen deposition in the vagina, potentially reducing Lactobacillus energy supply and protective effects.
Female Microbiome Precision Health Implications
This review highlights the clinically significant effects of lifestyle behaviors on the female microbiome and associated health outcomes. While some behaviors, such as tobacco use and excessive hygiene, promote dysbiosis, others, including physical activity and high-fiber diets, are linked to more beneficial microbial profiles, although effects vary by anatomical site.
Future research should integrate multi-site longitudinal data to support precision interventions tailored to individual female health profiles.