New publication focuses on microbiome research in environmental, agricultural and biomedical areas

Two prominent microbiologists have launched a new peer-reviewed publication focusing on microbiome research in environmental, agricultural, and biomedical areas. Eric Wommack, from the University of Delaware's College of Earth, Ocean and Environment and Jacques Ravel, from the University of Maryland School of Medicine's Institute for Genome Sciences are the Editors-in-Chief of Microbiome, a BioMed Central (BMC) publication, which launched its first issue this week.

The new publication reflects the growing importance of the need for studying communities of microorganisms - microbiomes - and their functions in their natural environment whether that environment is the human body, the ocean, or any other habitat.

"Microbiology was once thought of as two exclusive subdisciplines - clinical microbiology and environmental microbiology - but the substantial technological advances, particularly over the past decade in DNA sequencing and analysis, have given scientists new common and interdisciplinary research interests," explains Ravel, who is studying the effect of the human microbiome on women's health, and is part of the NIH-funded Human Microbiome Project (HMP).

"Microbiome will facilitate the cross-fertilization of ideas, research methods and analyses, and theory between clinical and environmental microbiologists exploring the emergent impacts of microbial communities on the ecosystems they inhabit," says Wommack, a University of Delaware professor who researches the inner workings of microbial communities.

The central purpose of Microbiome is to unite investigators conducting research on microbial communities in environmental, agricultural, and biomedical arenas. Topics broadly addressing the study of microbial communities, such as, meta-genomics surveys, bioinformatics, other '-omics' approaches and surveys, and community/host interaction mathematical modeling will be covered.

The new issue of Microbiome features several innovative research papers from scientists at various institutions worldwide. For example, a team from the University of Guelph in Canada, summarized their novel stool substitute transplant therapy research. The team treated two patients with Clostridium difficile using a bacterial strain cocktail in an attempt to alleviate this difficult infection of the lower GI tract. Other innovative genomic research approaches are also featured in the first issue.

The journal includes a new section, "Microbiome Announcements," that will contain short reports describing microbiome datasets and their associated clinical or environmental data.